PATH SAMPLING CODES FOR CHARMM AND NAMD  <br>
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AIMLESS SHOOTING<br>
<a href="as_namd.tar">tarfile(NAMD)</a> <br>
<a href="as_charmm.tar">tarfile(CHARMM)</a> <br>
<a href="master-as.txt">master script</a> <br>
links to literature:<br>
<a href="http://link.aip.org/link/?JCPSA6/125/054108/1" target="_blank">"Obtaining Reaction Coordinates by Likelihood Maximization", Peters and Trout, J.Chem.Phys.(2006)</a> <br>
<a href="http://link.aip.org/link/?JCPSA6/127/034109/1" target="_blank">"Extensions to the Likelihood Maximization Approach for Finding Reaction Coordinates", Peters, Beckham, and Trout, J.Chem.Phys.(2007)</a> <br>
<a href="http://pubs.acs.org/cgi-bin/abstract.cgi/jacsat/2007/129/i15/abs/ja0687567.html" target="_blank">"Surface-Mediated Nucleation in the Solid-State Polymorph Transformation of Terephthalic Acid", Beckham et al., JACS(2007)</a>
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2D ISING MODEL EXAMPLE: AIMLESS SHOOTING AND LIKELIHOOD MAXIMIZATION<br>
<a href="ising-example.tar">ising-example.tar (c-code)</a> <br>
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EQUILIBRIUM PATH SAMPLING<br>
<a href="eps-charmm.tar">tarfile(CHARMM)</a> <br>

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